Index of /rsat/data/genomes/Lactobacillus_casei_m36_GCA_000309665.1/genome

[ICO]NameLast modifiedSizeDescription
[DIR]Parent Directory  -  
[TXT]Lactobacillus_casei_m36_GCA_000309665.1_aa.fasta09-Jan-2015 10:37 1.3M 
[ ]supercontig_GCA_000309665.1_ctg32_00123_1_19576_1.raw10-Feb-2015 14:29 19K 
[ ]supercontig_GCA_000309665.1_ctg32_00123_1_19576_1_repeatmasked.raw10-Feb-2015 14:29 19K 
[ ]supercontig_GCA_000309665.1_ctg71_00071_1_7913_1.raw10-Feb-2015 14:29 7.7K 
[ ]supercontig_GCA_000309665.1_ctg71_00071_1_7913_1_repeatmasked.raw10-Feb-2015 14:29 7.7K 
[ ]supercontig_GCA_000309665.1_ctg18_00045_1_8609_1.raw10-Feb-2015 14:29 8.4K 
[ ]supercontig_GCA_000309665.1_ctg18_00045_1_8609_1_repeatmasked.raw10-Feb-2015 14:29 8.4K 
[ ]supercontig_GCA_000309665.1_ctg16_00013_1_39582_1.raw10-Feb-2015 14:29 39K 
[ ]supercontig_GCA_000309665.1_ctg16_00013_1_39582_1_repeatmasked.raw10-Feb-2015 14:29 39K 
[ ]supercontig_GCA_000309665.1_ctg44_00082_1_37202_1.raw10-Feb-2015 14:29 36K 
[ ]supercontig_GCA_000309665.1_ctg44_00082_1_37202_1_repeatmasked.raw10-Feb-2015 14:29 36K 
[ ]supercontig_GCA_000309665.1_ctg55_00068_1_32502_1.raw10-Feb-2015 14:30 32K 
[ ]supercontig_GCA_000309665.1_ctg55_00068_1_32502_1_repeatmasked.raw10-Feb-2015 14:30 32K 
[ ]supercontig_GCA_000309665.1_ctg27_00037_1_4712_1.raw10-Feb-2015 14:30 4.6K 
[ ]supercontig_GCA_000309665.1_ctg27_00037_1_4712_1_repeatmasked.raw10-Feb-2015 14:30 4.6K 
[ ]supercontig_GCA_000309665.1_ctg57_00076_1_92685_1.raw10-Feb-2015 14:30 91K 
[ ]supercontig_GCA_000309665.1_ctg57_00076_1_92685_1_repeatmasked.raw10-Feb-2015 14:30 91K 
[ ]supercontig_GCA_000309665.1_ctg20_00012_1_3077_1.raw10-Feb-2015 14:30 3.0K 
[ ]supercontig_GCA_000309665.1_ctg20_00012_1_3077_1_repeatmasked.raw10-Feb-2015 14:30 3.0K 
[ ]supercontig_GCA_000309665.1_ctg31_00021_1_162133_1.raw10-Feb-2015 14:30 158K 
[ ]supercontig_GCA_000309665.1_ctg31_00021_1_162133_1_repeatmasked.raw10-Feb-2015 14:30 158K 
[ ]supercontig_GCA_000309665.1_ctg35_00100_1_125453_1.raw10-Feb-2015 14:30 123K 
[ ]supercontig_GCA_000309665.1_ctg35_00100_1_125453_1_repeatmasked.raw10-Feb-2015 14:30 123K 
[ ]supercontig_GCA_000309665.1_ctg11_00080_1_2885_1.raw10-Feb-2015 14:30 2.8K 
[ ]supercontig_GCA_000309665.1_ctg11_00080_1_2885_1_repeatmasked.raw10-Feb-2015 14:30 2.8K 
[ ]supercontig_GCA_000309665.1_ctg78_00152_1_1583_1.raw10-Feb-2015 14:30 1.5K 
[ ]supercontig_GCA_000309665.1_ctg78_00152_1_1583_1_repeatmasked.raw10-Feb-2015 14:30 1.5K 
[ ]supercontig_GCA_000309665.1_ctg65_00024_1_35652_1.raw10-Feb-2015 14:30 35K 
[ ]supercontig_GCA_000309665.1_ctg65_00024_1_35652_1_repeatmasked.raw10-Feb-2015 14:30 35K 
[ ]supercontig_GCA_000309665.1_ctg29_00094_1_168829_1.raw10-Feb-2015 14:30 165K 
[ ]supercontig_GCA_000309665.1_ctg29_00094_1_168829_1_repeatmasked.raw10-Feb-2015 14:30 165K 
[ ]supercontig_GCA_000309665.1_ctg58_00011_1_8655_1.raw10-Feb-2015 14:30 8.5K 
[ ]supercontig_GCA_000309665.1_ctg58_00011_1_8655_1_repeatmasked.raw10-Feb-2015 14:30 8.5K 
[ ]supercontig_GCA_000309665.1_ctg15_00101_1_18279_1.raw10-Feb-2015 14:30 18K 
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[ ]supercontig_GCA_000309665.1_ctg76_00116_1_2027_1_repeatmasked.raw10-Feb-2015 14:30 2.0K 
[ ]supercontig_GCA_000309665.1_ctg62_00051_1_12256_1.raw10-Feb-2015 14:30 12K 
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[ ]supercontig_GCA_000309665.1_ctg67_00119_1_4019_1.raw10-Feb-2015 14:30 3.9K 
[ ]supercontig_GCA_000309665.1_ctg67_00119_1_4019_1_repeatmasked.raw10-Feb-2015 14:30 3.9K 
[ ]supercontig_GCA_000309665.1_ctg02_00038_1_25267_1.raw10-Feb-2015 14:30 25K 
[ ]supercontig_GCA_000309665.1_ctg02_00038_1_25267_1_repeatmasked.raw10-Feb-2015 14:30 25K 
[ ]supercontig_GCA_000309665.1_ctg17_00085_1_45984_1.raw10-Feb-2015 14:30 45K 
[ ]supercontig_GCA_000309665.1_ctg17_00085_1_45984_1_repeatmasked.raw10-Feb-2015 14:30 45K 
[ ]supercontig_GCA_000309665.1_ctg14_00018_1_86993_1.raw10-Feb-2015 14:30 85K 
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[ ]supercontig_GCA_000309665.1_ctg69_00004_1_11861_1.raw10-Feb-2015 14:30 12K 
[ ]supercontig_GCA_000309665.1_ctg69_00004_1_11861_1_repeatmasked.raw10-Feb-2015 14:30 12K 
[ ]supercontig_GCA_000309665.1_ctg49_00034_1_131901_1.raw10-Feb-2015 14:30 129K 
[ ]supercontig_GCA_000309665.1_ctg49_00034_1_131901_1_repeatmasked.raw10-Feb-2015 14:30 129K 
[ ]supercontig_GCA_000309665.1_ctg24_00029_1_120864_1.raw10-Feb-2015 14:30 118K 
[ ]supercontig_GCA_000309665.1_ctg24_00029_1_120864_1_repeatmasked.raw10-Feb-2015 14:30 118K 
[ ]supercontig_GCA_000309665.1_ctg23_00027_1_156759_1.raw10-Feb-2015 14:30 153K 
[ ]supercontig_GCA_000309665.1_ctg23_00027_1_156759_1_repeatmasked.raw10-Feb-2015 14:30 153K 
[ ]supercontig_GCA_000309665.1_ctg47_00077_1_65333_1.raw10-Feb-2015 14:30 64K 
[ ]supercontig_GCA_000309665.1_ctg47_00077_1_65333_1_repeatmasked.raw10-Feb-2015 14:30 64K 
[ ]supercontig_GCA_000309665.1_ctg08_00088_1_5778_1.raw10-Feb-2015 14:30 5.6K 
[ ]supercontig_GCA_000309665.1_ctg08_00088_1_5778_1_repeatmasked.raw10-Feb-2015 14:30 5.6K 
[ ]supercontig_GCA_000309665.1_ctg37_00026_1_218667_1.raw10-Feb-2015 14:30 214K 
[ ]supercontig_GCA_000309665.1_ctg37_00026_1_218667_1_repeatmasked.raw10-Feb-2015 14:30 214K 
[ ]supercontig_GCA_000309665.1_ctg43_00074_1_8137_1.raw10-Feb-2015 14:30 7.9K 
[ ]supercontig_GCA_000309665.1_ctg43_00074_1_8137_1_repeatmasked.raw10-Feb-2015 14:30 7.9K 
[ ]supercontig_GCA_000309665.1_ctg05_00019_1_62796_1.raw10-Feb-2015 14:30 61K 
[ ]supercontig_GCA_000309665.1_ctg05_00019_1_62796_1_repeatmasked.raw10-Feb-2015 14:30 61K 
[ ]supercontig_GCA_000309665.1_ctg33_00047_1_129507_1.raw10-Feb-2015 14:30 126K 
[ ]supercontig_GCA_000309665.1_ctg33_00047_1_129507_1_repeatmasked.raw10-Feb-2015 14:30 126K 
[ ]supercontig_GCA_000309665.1_ctg21_00095_1_10207_1.raw10-Feb-2015 14:30 10K 
[ ]supercontig_GCA_000309665.1_ctg21_00095_1_10207_1_repeatmasked.raw10-Feb-2015 14:30 10K 
[ ]supercontig_GCA_000309665.1_ctg63_00049_1_102858_1.raw10-Feb-2015 14:30 100K 
[ ]supercontig_GCA_000309665.1_ctg63_00049_1_102858_1_repeatmasked.raw10-Feb-2015 14:30 100K 
[ ]supercontig_GCA_000309665.1_ctg07_00099_1_16912_1.raw10-Feb-2015 14:30 17K 
[ ]supercontig_GCA_000309665.1_ctg07_00099_1_16912_1_repeatmasked.raw10-Feb-2015 14:30 17K 
[ ]supercontig_GCA_000309665.1_ctg26_00107_1_5883_1.raw10-Feb-2015 14:30 5.7K 
[ ]supercontig_GCA_000309665.1_ctg26_00107_1_5883_1_repeatmasked.raw10-Feb-2015 14:30 5.7K 
[ ]supercontig_GCA_000309665.1_ctg72_00072_1_2134_1.raw10-Feb-2015 14:30 2.1K 
[ ]supercontig_GCA_000309665.1_ctg72_00072_1_2134_1_repeatmasked.raw10-Feb-2015 14:30 2.1K 
[ ]supercontig_GCA_000309665.1_ctg74_00092_1_4299_1.raw10-Feb-2015 14:30 4.2K 
[ ]supercontig_GCA_000309665.1_ctg74_00092_1_4299_1_repeatmasked.raw10-Feb-2015 14:30 4.2K 
[ ]supercontig_GCA_000309665.1_ctg61_00083_1_6354_1.raw10-Feb-2015 14:30 6.2K 
[ ]supercontig_GCA_000309665.1_ctg61_00083_1_6354_1_repeatmasked.raw10-Feb-2015 14:30 6.2K 
[ ]supercontig_GCA_000309665.1_ctg10_00044_1_13103_1.raw10-Feb-2015 14:30 13K 
[ ]supercontig_GCA_000309665.1_ctg10_00044_1_13103_1_repeatmasked.raw10-Feb-2015 14:30 13K 
[ ]supercontig_GCA_000309665.1_ctg48_00093_1_34705_1.raw10-Feb-2015 14:30 34K 
[ ]supercontig_GCA_000309665.1_ctg48_00093_1_34705_1_repeatmasked.raw10-Feb-2015 14:30 34K 
[ ]supercontig_GCA_000309665.1_ctg77_00147_1_2041_1.raw10-Feb-2015 14:30 2.0K 
[ ]supercontig_GCA_000309665.1_ctg77_00147_1_2041_1_repeatmasked.raw10-Feb-2015 14:30 2.0K 
[ ]supercontig_GCA_000309665.1_ctg50_00043_1_39517_1.raw10-Feb-2015 14:30 39K 
[ ]supercontig_GCA_000309665.1_ctg50_00043_1_39517_1_repeatmasked.raw10-Feb-2015 14:30 39K 
[ ]supercontig_GCA_000309665.1_ctg39_00065_1_10203_1.raw10-Feb-2015 14:30 10K 
[ ]supercontig_GCA_000309665.1_ctg39_00065_1_10203_1_repeatmasked.raw10-Feb-2015 14:30 10K 
[ ]supercontig_GCA_000309665.1_ctg64_00040_1_44133_1.raw10-Feb-2015 14:30 43K 
[ ]supercontig_GCA_000309665.1_ctg64_00040_1_44133_1_repeatmasked.raw10-Feb-2015 14:30 43K 
[ ]supercontig_GCA_000309665.1_ctg12_00002_1_54600_1.raw10-Feb-2015 14:30 53K 
[ ]supercontig_GCA_000309665.1_ctg12_00002_1_54600_1_repeatmasked.raw10-Feb-2015 14:30 53K 
[ ]supercontig_GCA_000309665.1_ctg41_00020_1_60752_1.raw10-Feb-2015 14:30 59K 
[ ]supercontig_GCA_000309665.1_ctg41_00020_1_60752_1_repeatmasked.raw10-Feb-2015 14:30 59K 
[ ]supercontig_GCA_000309665.1_ctg52_00023_1_2661_1.raw10-Feb-2015 14:30 2.6K 
[ ]supercontig_GCA_000309665.1_ctg52_00023_1_2661_1_repeatmasked.raw10-Feb-2015 14:30 2.6K 
[ ]supercontig_GCA_000309665.1_ctg56_00030_1_12558_1.raw10-Feb-2015 14:30 12K 
[ ]supercontig_GCA_000309665.1_ctg56_00030_1_12558_1_repeatmasked.raw10-Feb-2015 14:30 12K 
[ ]supercontig_GCA_000309665.1_ctg45_00036_1_52411_1.raw10-Feb-2015 14:30 51K 
[ ]supercontig_GCA_000309665.1_ctg45_00036_1_52411_1_repeatmasked.raw10-Feb-2015 14:30 51K 
[ ]supercontig_GCA_000309665.1_ctg66_00114_1_33286_1.raw10-Feb-2015 14:30 33K 
[ ]supercontig_GCA_000309665.1_ctg66_00114_1_33286_1_repeatmasked.raw10-Feb-2015 14:30 33K 
[ ]supercontig_GCA_000309665.1_ctg19_00010_1_22725_1.raw10-Feb-2015 14:30 22K 
[ ]supercontig_GCA_000309665.1_ctg19_00010_1_22725_1_repeatmasked.raw10-Feb-2015 14:30 22K 
[ ]supercontig_GCA_000309665.1_ctg54_00033_1_37823_1.raw10-Feb-2015 14:30 37K 
[ ]supercontig_GCA_000309665.1_ctg54_00033_1_37823_1_repeatmasked.raw10-Feb-2015 14:30 37K 
[ ]supercontig_GCA_000309665.1_ctg70_00009_1_2290_1.raw10-Feb-2015 14:30 2.2K 
[ ]supercontig_GCA_000309665.1_ctg70_00009_1_2290_1_repeatmasked.raw10-Feb-2015 14:30 2.2K 
[ ]supercontig_GCA_000309665.1_ctg68_00001_1_3279_1.raw10-Feb-2015 14:30 3.2K 
[ ]supercontig_GCA_000309665.1_ctg68_00001_1_3279_1_repeatmasked.raw10-Feb-2015 14:30 3.2K 
[ ]supercontig_GCA_000309665.1_ctg01_00056_1_29024_1.raw10-Feb-2015 14:30 28K 
[ ]supercontig_GCA_000309665.1_ctg01_00056_1_29024_1_repeatmasked.raw10-Feb-2015 14:30 28K 
[ ]supercontig_GCA_000309665.1_ctg30_00091_1_17348_1.raw10-Feb-2015 14:30 17K 
[ ]supercontig_GCA_000309665.1_ctg30_00091_1_17348_1_repeatmasked.raw10-Feb-2015 14:30 17K 
[ ]supercontig_GCA_000309665.1_ctg25_00058_1_9943_1.raw10-Feb-2015 14:30 9.7K 
[ ]supercontig_GCA_000309665.1_ctg25_00058_1_9943_1_repeatmasked.raw10-Feb-2015 14:30 9.7K 
[ ]supercontig_GCA_000309665.1_ctg28_00014_1_64683_1.raw10-Feb-2015 14:30 63K 
[ ]supercontig_GCA_000309665.1_ctg28_00014_1_64683_1_repeatmasked.raw10-Feb-2015 14:30 63K 
[ ]supercontig_GCA_000309665.1_ctg40_00050_1_11968_1.raw10-Feb-2015 14:30 12K 
[ ]supercontig_GCA_000309665.1_ctg40_00050_1_11968_1_repeatmasked.raw10-Feb-2015 14:30 12K 
[ ]supercontig_GCA_000309665.1_ctg75_00115_1_6158_1.raw10-Feb-2015 14:30 6.0K 
[ ]supercontig_GCA_000309665.1_ctg75_00115_1_6158_1_repeatmasked.raw10-Feb-2015 14:30 6.0K 
[ ]supercontig_GCA_000309665.1_ctg59_00017_1_69138_1.raw10-Feb-2015 14:30 68K 
[ ]supercontig_GCA_000309665.1_ctg59_00017_1_69138_1_repeatmasked.raw10-Feb-2015 14:30 68K 
[ ]supercontig_GCA_000309665.1_ctg53_00057_1_2008_1.raw10-Feb-2015 14:30 2.0K 
[ ]supercontig_GCA_000309665.1_ctg53_00057_1_2008_1_repeatmasked.raw10-Feb-2015 14:30 2.0K 
[ ]supercontig_GCA_000309665.1_ctg42_00022_1_33668_1.raw10-Feb-2015 14:30 33K 
[ ]supercontig_GCA_000309665.1_ctg42_00022_1_33668_1_repeatmasked.raw10-Feb-2015 14:30 33K 
[ ]supercontig_GCA_000309665.1_ctg22_00087_1_14292_1.raw10-Feb-2015 14:30 14K 
[ ]supercontig_GCA_000309665.1_ctg22_00087_1_14292_1_repeatmasked.raw10-Feb-2015 14:30 14K 
[ ]supercontig_GCA_000309665.1_ctg46_00053_1_10191_1.raw10-Feb-2015 14:30 10K 
[ ]supercontig_GCA_000309665.1_ctg46_00053_1_10191_1_repeatmasked.raw10-Feb-2015 14:30 10K 
[ ]supercontig_GCA_000309665.1_ctg13_00032_1_56726_1.raw10-Feb-2015 14:30 55K 
[ ]supercontig_GCA_000309665.1_ctg13_00032_1_56726_1_repeatmasked.raw10-Feb-2015 14:30 55K 
[ ]supercontig_GCA_000309665.1_ctg06_00070_1_85831_1.raw10-Feb-2015 14:30 84K 
[ ]supercontig_GCA_000309665.1_ctg06_00070_1_85831_1_repeatmasked.raw10-Feb-2015 14:30 84K 
[ ]supercontig_GCA_000309665.1_ctg36_00046_1_31267_1.raw10-Feb-2015 14:30 31K 
[ ]supercontig_GCA_000309665.1_ctg36_00046_1_31267_1_repeatmasked.raw10-Feb-2015 14:30 31K 
[ ]supercontig_GCA_000309665.1_ctg03_00063_1_11632_1.raw10-Feb-2015 14:30 11K 
[ ]supercontig_GCA_000309665.1_ctg03_00063_1_11632_1_repeatmasked.raw10-Feb-2015 14:30 11K 
[ ]supercontig_GCA_000309665.1_ctg51_00078_1_12785_1.raw10-Feb-2015 14:30 12K 
[ ]supercontig_GCA_000309665.1_ctg51_00078_1_12785_1_repeatmasked.raw10-Feb-2015 14:30 12K 
[ ]supercontig_GCA_000309665.1_ctg09_00016_1_77687_1.raw10-Feb-2015 14:30 76K 
[ ]supercontig_GCA_000309665.1_ctg09_00016_1_77687_1_repeatmasked.raw10-Feb-2015 14:30 76K 
[ ]supercontig_GCA_000309665.1_ctg38_00121_1_76081_1.raw10-Feb-2015 14:30 74K 
[ ]supercontig_GCA_000309665.1_ctg38_00121_1_76081_1_repeatmasked.raw10-Feb-2015 14:30 74K 
[ ]supercontig_GCA_000309665.1_ctg04_00066_1_43998_1.raw10-Feb-2015 14:30 43K 
[ ]supercontig_GCA_000309665.1_ctg04_00066_1_43998_1_repeatmasked.raw10-Feb-2015 14:30 43K 
[ ]supercontig_GCA_000309665.1_ctg34_00103_1_33145_1.raw10-Feb-2015 14:30 32K 
[ ]supercontig_GCA_000309665.1_ctg34_00103_1_33145_1_repeatmasked.raw10-Feb-2015 14:30 32K 
[ ]contig.tab10-Feb-2015 14:30 9.4K 
[TXT]contigs.txt10-Feb-2015 14:30 7.9K 
[ ]lincrna.tab10-Feb-2015 14:30 428  
[ ]lincrna_names.tab10-Feb-2015 14:30 200  
[ ]mirna.tab10-Feb-2015 14:30 424  
[ ]mirna_names.tab10-Feb-2015 14:30 196  
[ ]misc_rna.tab10-Feb-2015 14:30 430  
[ ]misc_rna_names.tab10-Feb-2015 14:30 202  
[ ]processed_transcript.tab10-Feb-2015 14:30 454  
[ ]processed_transcript_names.tab10-Feb-2015 14:30 226  
[ ]snorna.tab10-Feb-2015 14:30 426  
[ ]snorna_names.tab10-Feb-2015 14:30 198  
[ ]snrna.tab10-Feb-2015 14:30 424  
[ ]snrna_names.tab10-Feb-2015 14:30 196  
[ ]srna.tab10-Feb-2015 14:30 422  
[ ]srna_names.tab10-Feb-2015 14:30 194  
[ ]cds.tab10-Feb-2015 14:32 621K 
[ ]cds_names.tab10-Feb-2015 14:32 2.5M 
[ ]coding_exon.tab10-Feb-2015 14:32 341K 
[ ]exon.tab10-Feb-2015 14:32 329K 
[ ]gene.tab10-Feb-2015 14:32 444K 
[ ]gene_names.tab10-Feb-2015 14:32 462K 
[ ]gene_to_reaction.tab10-Feb-2015 14:32 1.7M 
[ ]intron.tab10-Feb-2015 14:32 332  
[ ]mrna.tab10-Feb-2015 14:32 418K 
[ ]mrna_names.tab10-Feb-2015 14:32 467K 
[ ]organism.tab10-Feb-2015 14:32 362  
[ ]organism_names.tab10-Feb-2015 14:32 355  
[ ]protein_coding.tab10-Feb-2015 14:32 418K 
[ ]protein_coding_names.tab10-Feb-2015 14:32 467K 
[ ]utr.tab10-Feb-2015 14:32 386K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_start_codons.wc10-Feb-2015 14:32 233K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_start_codon_frequencies10-Feb-2015 14:32 2.0K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_stop_codons.wc10-Feb-2015 14:32 233K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_stop_codon_frequencies10-Feb-2015 14:32 2.1K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_gene_segments.fasta.gz10-Feb-2015 14:32 713K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_gene_segments.pos10-Feb-2015 14:32 248K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_intergenic_segments.fasta.gz10-Feb-2015 14:32 330K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_intergenic_segments.pos10-Feb-2015 14:32 289K 
[ ]Lactobacillus_casei_m36_GCA_000309665.1_stats.tab10-Feb-2015 14:32 482  
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[ ]Lactobacillus_casei_m36_GCA_000309665.1_intergenic_segments_lengths.tab10-Feb-2015 14:33 9.9K 
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[ ]Lactobacillus_casei_m36_GCA_000309665.1_upstream.ft10-Feb-2015 14:33 1.9M 
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[ ]Lactobacillus_casei_m36_GCA_000309665.1_upstream-noorf_segments_lengths.tab10-Feb-2015 14:33 1.5K 
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