# KEGG PATHWAY organism list # pathway KEGG Pathway Database # path Release 56.0+/10-03, Oct 10 # Kyoto University Bioinformatics Center # 117,117 entries # Last update: 10/10/03 # amr Acaryochloris marina app Accumulibacter phosphatis apt Acetobacter pasteurianus aar Acetohalobium arabaticum acl Acholeplasma laidlawii afn Acidaminococcus fermentans asc Acidilobus saccharovorans afo Acidimicrobium ferrooxidans DSM 10331 acr Acidiphilium cryptum JF-5 afr Acidithiobacillus ferrooxidans ATCC 23270 afe Acidithiobacillus ferrooxidans ATCC 53993 aca Acidobacterium capsulatum ace Acidothermus cellulolyticus aav Acidovorax avenae dia Acidovorax ebreus ajs Acidovorax sp. JS42 abi Aciduliprofundum boonei abn Acinetobacter baumannii AB0057 abb Acinetobacter baumannii AB307-0294 abc Acinetobacter baumannii ACICU acb Acinetobacter baumannii ATCC 17978 aby Acinetobacter baumannii AYE abm Acinetobacter baumannii SDF aci Acinetobacter sp. ADP1 acd Acinetobacter sp. DR1 apa Actinobacillus pleuropneumoniae AP76 (serotype 7) apj Actinobacillus pleuropneumoniae JL03 (serotype 3) apl Actinobacillus pleuropneumoniae L20 (serotype 5b) asu Actinobacillus succinogenes ami Actinosynnema mirum api Acyrthosiphon pisum (pea aphid) aag Aedes aegypti (yellow fever mosquito) aha Aeromonas hydrophila asa Aeromonas salmonicida ape Aeropyrum pernix aat Aggregatibacter actinomycetemcomitans aap Aggregatibacter aphrophilus ara Agrobacterium radiobacter K84 atu Agrobacterium tumefaciens C58 avi Agrobacterium vitis S4 amu Akkermansia muciniphila abo Alcanivorax borkumensis aac Alicyclobacillus acidocaldarius vsa Aliivibrio salmonicida LFI1238 aeh Alkalilimnicola ehrlichei amt Alkaliphilus metalliredigens aoe Alkaliphilus oremlandii alv Allochromatium vinosum amc Alteromonas macleodii aco Aminobacterium colombiense adg Ammonifex degensii amd Amycolatopsis mediterranei naz Anabaena azollae 0708 ana Anabaena sp. PCC7120 ava Anabaena variabilis ate Anaerocellum thermophilum apr Anaerococcus prevotii acp Anaeromyxobacter dehalogenans 2CP-1 ade Anaeromyxobacter dehalogenans 2CP-C afw Anaeromyxobacter sp. Fw109-5 ank Anaeromyxobacter sp. K acn Anaplasma centrale amf Anaplasma marginale Florida ama Anaplasma marginale St. Maries aph Anaplasma phagocytophilum aga Anopheles gambiae (mosquito) afl Anoxybacillus flavithermus ame Apis mellifera (honey bee) aae Aquifex aeolicus ath Arabidopsis thaliana (thale cress) ahe Arcanobacterium haemolyticum afu Archaeoglobus fulgidus apo Archaeoglobus profundus abu Arcobacter butzleri ant Arcobacter nitrofigilis eba Aromatoleum aromaticum EbN1 aau Arthrobacter aurescens ach Arthrobacter chlorophenolicus art Arthrobacter sp. FB24 ago Ashbya gossypii (Eremothecium gossypii) act Aspergillus clavatus afv Aspergillus flavus afm Aspergillus fumigatus ani Aspergillus nidulans ang Aspergillus niger aor Aspergillus oryzae apv Atopobium parvulum azo Azoarcus sp. BH72 azc Azorhizobium caulinodans azl Azospirillum sp. B510 avn Azotobacter vinelandii bbo Babesia bovis bay Bacillus amyloliquefaciens bai Bacillus anthracis A0248 ban Bacillus anthracis Ames bar Bacillus anthracis Ames 0581 bah Bacillus anthracis CDC 684 bal Bacillus anthracis CI bat Bacillus anthracis Sterne bcx Bacillus cereus 03BB102 bcr Bacillus cereus AH187 bcu Bacillus cereus AH820 bca Bacillus cereus ATCC 10987 bce Bacillus cereus ATCC 14579 bcb Bacillus cereus B4264 bcg Bacillus cereus G9842 bcq Bacillus cereus Q1 bcz Bacillus cereus ZK bcl Bacillus clausii bcy Bacillus cytotoxis NVH 391-98 bha Bacillus halodurans bli Bacillus licheniformis ATCC 14580 bld Bacillus licheniformis DSM13 bmd Bacillus megaterium DSM319 bmq Bacillus megaterium QM B1551 bpf Bacillus pseudofirmus bpu Bacillus pumilus bse Bacillus selenitireducens bsu Bacillus subtilis bss Bacillus subtilis subsp. spizizenii btk Bacillus thuringiensis 97-27 btl Bacillus thuringiensis Al Hakam btb Bacillus thuringiensis BMB171 bts Bacillus tusciae bwe Bacillus weihenstephanensis bfs Bacteroides fragilis NCTC9343 bfr Bacteroides fragilis YCH46 bth Bacteroides thetaiotaomicron bvu Bacteroides vulgatus bbk Bartonella bacilliformis bgr Bartonella grahamii bhe Bartonella henselae bqu Bartonella quintana btr Bartonella tribocorum bci Baumannia cicadellinicola bba Bdellovibrio bacteriovorus bid Beijerinckia indica bcv Beutenbergia cavernae bad Bifidobacterium adolescentis bla Bifidobacterium animalis subsp. lactis AD011 blc Bifidobacterium animalis subsp. lactis Bl-04 blt Bifidobacterium animalis subsp. lactis DSM 10140 bde Bifidobacterium dentium blj Bifidobacterium longum DJO10A blo Bifidobacterium longum NCC2705 bln Bifidobacterium longum subsp. infantis ATCC 15697 bll Bifidobacterium longum subsp. longum JDM301 bbl Blattabacterium sp. (Blattella germanica) bpi Blattabacterium sp. (Periplaneta americana) bav Bordetella avium bbr Bordetella bronchiseptica bpa Bordetella parapertussis bpe Bordetella pertussis bpt Bordetella petrii baf Borrelia afzelii bbu Borrelia burgdorferi B31 bbz Borrelia burgdorferi ZS7 bdu Borrelia duttonii bga Borrelia garinii bhr Borrelia hermsii bre Borrelia recurrentis btu Borrelia turicatae bta Bos taurus (cow) bfu Botryotinia fuckeliana bfa Brachybacterium faecium bhy Brachyspira hyodysenteriae brm Brachyspira murdochii bpo Brachyspira pilosicoli bja Bradyrhizobium japonicum bbt Bradyrhizobium sp. BTAi1 bra Bradyrhizobium sp. ORS278 bfo Branchiostoma floridae (Florida lancelet) bbe Brevibacillus brevis bsb Brevundimonas subvibrioides bmb Brucella abortus 9-941 bmc Brucella abortus S19 bcs Brucella canis bmi Brucella melitensis ATCC 23457 bmf Brucella melitensis biovar Abortus bme Brucella melitensis bv. 1 16M bmr Brucella microti bov Brucella ovis bms Brucella suis 1330 bmt Brucella suis ATCC 23445 bmy Brugia malayi (filaria) bap Buchnera aphidicola 5A buc Buchnera aphidicola APS bab Buchnera aphidicola Bp bcc Buchnera aphidicola Cc bas Buchnera aphidicola Sg bau Buchnera aphidicola Tuc7 bac Burkholderia ambifaria MC40-6 bcn Burkholderia cenocepacia AU1054 bch Burkholderia cenocepacia HI2424 bcj Burkholderia cenocepacia J2315 bcm Burkholderia cenocepacia MC0-3 bam Burkholderia cepacia bgl Burkholderia glumae bma Burkholderia mallei ATCC 23344 bml Burkholderia mallei NCTC 10229 bmn Burkholderia mallei NCTC 10247 bmv Burkholderia mallei SAVP1 bmu Burkholderia multivorans ATCC 17616 (JGI) bmj Burkholderia multivorans ATCC 17616 (Tohoku) bph Burkholderia phymatum bpy Burkholderia phytofirmans bpl Burkholderia pseudomallei 1106a bpm Burkholderia pseudomallei 1710b bpd Burkholderia pseudomallei 668 bps Burkholderia pseudomallei K96243 bpr Burkholderia pseudomallei MSHR346 bur Burkholderia sp. 383 bge Burkholderia sp. CCGE1002 bgf Burkholderia sp. CCGE1003 bte Burkholderia thailandensis bvi Burkholderia vietnamiensis bxe Burkholderia xenovorans bpb Butyrivibrio proteoclasticus cbr Caenorhabditis briggsae cel Caenorhabditis elegans (nematode) cob Caldicellulosiruptor obsidiansis csc Caldicellulosiruptor saccharolyticus cma Caldivirga maquilingensis cco Campylobacter concisus 13826 ccv Campylobacter curvus cff Campylobacter fetus cha Campylobacter hominis ATCC BAA-381 cjj Campylobacter jejuni 81-176 cju Campylobacter jejuni 81116 cje Campylobacter jejuni NCTC11168 cjr Campylobacter jejuni RM1221 cjd Campylobacter jejuni subsp. doylei 269.97 cla Campylobacter lari cal Candida albicans cdu Candida dubliniensis cgr Candida glabrata ctp Candida tropicalis aas Candidatus Amoebophilus asiaticus aps Candidatus Azobacteroides pseudotrichonymphae bfl Candidatus Blochmannia floridanus bpn Candidatus Blochmannia pennsylvanicus crp Candidatus Carsonella ruddii dau Candidatus Desulforudis audaxviator hde Candidatus Hamiltonella defensa hci Candidatus Hodgkinia cicadicola kcr Candidatus Korarchaeum cryptofilum aba Candidatus Koribacter versatilis las Candidatus Liberibacter asiaticus mbn Candidatus Methanoregula boonei mpl Candidatus Methanosphaerula palustris nde Candidatus Nitrospira defluvii pub Candidatus Pelagibacter ubique pal Candidatus Phytoplasma australiense pml Candidatus Phytoplasma mali pcu Candidatus Protochlamydia amoebophila apb Candidatus Puniceispirillum marinum rip Candidatus Riesia pediculicola rma Candidatus Ruthia magnifica sum Candidatus Sulcia muelleri CARI smh Candidatus Sulcia muelleri DMIN smg Candidatus Sulcia muelleri GWSS sms Candidatus Sulcia muelleri SMDSEM vok Candidatus Vesicomyosocius okutanii zin Candidatus Zinderia insecticola CARI cfa Canis familiaris (dog) coc Capnocytophaga ochracea chy Carboxydothermus hydrogenoformans cai Catenulispora acidiphila ccr Caulobacter crescentus CB15 ccs Caulobacter crescentus NA1000 cse Caulobacter segnis cak Caulobacter sp. K31 cfl Cellulomonas flavigena cja Cellvibrio japonicus cpi Chitinophaga pinensis cmu Chlamydia muridarum ctb Chlamydia trachomatis 434/Bu cta Chlamydia trachomatis A/HAR-13 (serovar A) ctj Chlamydia trachomatis B/Jali20/OT ctr Chlamydia trachomatis D/UW-3/CX (serovar D) ctl Chlamydia trachomatis L2b/UCH-1/proctitis cre Chlamydomonas reinhardtii cab Chlamydophila abortus cca Chlamydophila caviae cfe Chlamydophila felis cpa Chlamydophila pneumoniae AR39 cpn Chlamydophila pneumoniae CWL029 cpj Chlamydophila pneumoniae J138 cpt Chlamydophila pneumoniae TW183 cpc Chlorobaculum parvum NCIB 8327 cte Chlorobaculum tepidum cch Chlorobium chlorochromatii cli Chlorobium limicola cpb Chlorobium phaeobacteroides BS1 cph Chlorobium phaeobacteroides DSM 266 pvi Chlorobium vibrioformis cag Chloroflexus aggregans cau Chloroflexus aurantiacus chl Chloroflexus sp. Y-400-fl cts Chloroherpeton thalassium cvi Chromobacterium violaceum csa Chromohalobacter salexigens cin Ciona intestinalis (sea squirt) cko Citrobacter koseri ATCC BAA-895 cro Citrobacter rodentium cmi Clavibacter michiganensis subsp. michiganensis cms Clavibacter michiganensis subsp. sepedonicus clu Clavispora lusitaniae clo Clostridiales genomosp. BVAB3 cac Clostridium acetobutylicum cbe Clostridium beijerinckii cba Clostridium botulinum A ATCC 19397 cbo Clostridium botulinum A ATCC 3502 cbh Clostridium botulinum A Hall cby Clostridium botulinum A2 cbl Clostridium botulinum A3 Loch Maree cbk Clostridium botulinum B Eklund 17B cbb Clostridium botulinum B1 Okra cbi Clostridium botulinum Ba4 cbt Clostridium botulinum E3 cbf Clostridium botulinum F Langeland cce Clostridium cellulolyticum ccb Clostridium cellulovorans cdf Clostridium difficile 630 cdc Clostridium difficile CD196 cdl Clostridium difficile R20291 ckl Clostridium kluyveri DSM 555 ckr Clostridium kluyveri NBRC 12016 clj Clostridium ljungdahlii cno Clostridium novyi cpe Clostridium perfringens 13 cpf Clostridium perfringens ATCC 13124 cpr Clostridium perfringens SM101 cpy Clostridium phytofermentans ctc Clostridium tetani E88 cth Clostridium thermocellum cim Coccidioides immitis cps Colwellia psychrerythraea ctt Comamonas testosteroni cwo Conexibacter woesei cci Coprinopsis cinerea cpo Coprothermobacter proteolyticus caa Coraliomargarita akajimensis car Corynebacterium aurimucosum cdi Corynebacterium diphtheriae cef Corynebacterium efficiens cgb Corynebacterium glutamicum ATCC 13032 (Bielefeld) cgl Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) cgt Corynebacterium glutamicum R cjk Corynebacterium jeikeium ckp Corynebacterium kroppenstedtii cpu Corynebacterium pseudotuberculosis cur Corynebacterium urealyticum cbg Coxiella burnetii CbuG_Q212 cbc Coxiella burnetii CbuK_Q154 cbd Coxiella burnetii Dugway 5J108-111 cbs Coxiella burnetii RSA 331 cbu Coxiella burnetii RSA 493 cat Croceibacter atlanticus ctu Cronobacter turicensis ccu Cryptobacterium curtum cnb Cryptococcus neoformans B-3501A cne Cryptococcus neoformans JEC21 cho Cryptosporidium hominis cpv Cryptosporidium parvum cqu Culex quinquefasciatus (southern house mosquito) rme Cupriavidus metallidurans cti Cupriavidus taiwanensis cme Cyanidioschyzon merolae cya Cyanobacteria Yellowstone A-Prime cyb Cyanobacteria Yellowstone B-Prime cyu Cyanobacterium UCYN-A cyt Cyanothece sp. ATCC 51142 cyc Cyanothece sp. PCC 7424 cyn Cyanothece sp. PCC 7425 cyp Cyanothece sp. PCC 8801 cyh Cyanothece sp. PCC 8802 chu Cytophaga hutchinsonii dre Danio rerio (zebrafish) dha Debaryomyces hansenii dar Dechloromonas aromatica ddf Deferribacter desulfuricans SSM1 det Dehalococcoides ethenogenes deb Dehalococcoides sp. BAV1 deh Dehalococcoides sp. CBDB1 deg Dehalococcoides sp. GT dev Dehalococcoides sp. VS ddr Deinococcus deserti dge Deinococcus geothermalis dra Deinococcus radiodurans dac Delftia acidovorans dap Denitrovibrio acetiphilus dbr Desulfarculus baarsii dal Desulfatibacillum alkenivorans dhd Desulfitobacterium hafniense DCB-2 dsy Desulfitobacterium hafniense Y51 dat Desulfobacterium autotrophicum dol Desulfococcus oleovorans drt Desulfohalobium retbaense dba Desulfomicrobium baculatum dps Desulfotalea psychrophila dae Desulfotomaculum acetoxidans drm Desulfotomaculum reducens dds Desulfovibrio desulfuricans ATCC 27774 dde Desulfovibrio desulfuricans G20 dma Desulfovibrio magneticus dsa Desulfovibrio salexigens dvl Desulfovibrio vulgaris DP4 dvu Desulfovibrio vulgaris Hildenborough dvm Desulfovibrio vulgaris Miyazaki F dak Desulfurivibrio alkaliphilus dka Desulfurococcus kamchatkensis dno Dichelobacter nodosus ddd Dickeya dadantii 3937 ddc Dickeya dadantii Ech586 dda Dickeya dadantii Ech703 dze Dickeya zeae dth Dictyoglomus thermophilum dtu Dictyoglomus turgidum ddi Dictyostelium discoideum (cellular slime mold) dsh Dinoroseobacter shibae dan Drosophila ananassae der Drosophila erecta dgr Drosophila grimshawi dme Drosophila melanogaster (fruit fly) dmo Drosophila mojavensis dpe Drosophila persimilis dpo Drosophila pseudoobscura pseudoobscura dse Drosophila sechellia dsi Drosophila simulans dvi Drosophila virilis dwi Drosophila willistoni dya Drosophila yakuba dfe Dyadobacter fermentans eic Edwardsiella ictaluri etr Edwardsiella tarda ele Eggerthella lenta ecn Ehrlichia canis ech Ehrlichia chaffeensis erg Ehrlichia ruminantium Gardel erw Ehrlichia ruminantium Welgevonden (France) eru Ehrlichia ruminantium Welgevonden (South Africa) emi Elusimicrobium minutum ecu Encephalitozoon cuniculi edi Entamoeba dispar ehi Entamoeba histolytica enc Enterobacter cloacae esa Enterobacter sakazakii ent Enterobacter sp. 638 efa Enterococcus faecalis ecb Equus caballus (horse) eay Erwinia amylovora ATCC 49946 eam Erwinia amylovora CFBP1430 ebi Erwinia billingiae eca Erwinia carotovora epy Erwinia pyrifoliae eta Erwinia tasmaniensis eli Erythrobacter litoralis eck Escherichia coli 55989 (EAEC) ebr Escherichia coli B REL606 ebd Escherichia coli BL21-Gold(DE3)pLysS AG ecl Escherichia coli C ATCC 8739 ecd Escherichia coli K-12 DH10B ebw Escherichia coli K-12 MC4100(MuLac) BW2952 eco Escherichia coli K-12 MG1655 ecj Escherichia coli K-12 W3110 ecv Escherichia coli O1 K1 H7 (APEC) eoh Escherichia coli O103 H2 12009 (EHEC) eoi Escherichia coli O111 H- 11128 (EHEC) ecg Escherichia coli O127 H6 E2348/69 (EPEC) ecw Escherichia coli O139 H28 E24377A (ETEC) ecy Escherichia coli O152 H28 SE11 (commensal) ecf Escherichia coli O157 H7 EC4115 (EHEC) ece Escherichia coli O157 H7 EDL933 (EHEC) ecs Escherichia coli O157 H7 Sakai (EHEC) etw Escherichia coli O157 H7 TW14359 (EHEC) eum Escherichia coli O17 K52 H18 UMN026 (ExPEC) eci Escherichia coli O18 K1 H7 UTI89 (UPEC) eoj Escherichia coli O26 H11 11368 (EHEC) ecz Escherichia coli O45 K1 H7 S88 (ExPEC) eok Escherichia coli O55 H7 CB9615 (EPEC) ecp Escherichia coli O6 K15 H31 536 (UPEC) ecc Escherichia coli O6 K2 H1 CFT073 (UPEC) ect Escherichia coli O7 K1 IAI39 (ExPEC) ecr Escherichia coli O8 IAI1 (commensal) ecq Escherichia coli O81 ED1a (commensal) ecx Escherichia coli O9 HS (commensal) ecm Escherichia coli SMS-3-5 (environmental) efe Escherichia fergusonii eel Eubacterium eligens ere Eubacterium rectale esi Exiguobacterium sibiricum eat Exiguobacterium sp. AT1b fpl Ferroglobus placidus fno Fervidobacterium nodosum fsu Fibrobacter succinogenes fma Finegoldia magna fba Flavobacteriaceae bacterium fbc Flavobacteriales bacterium HTCC2170 fjo Flavobacterium johnsoniae fps Flavobacterium psychrophilum ftn Francisella novicida U112 fph Francisella philomiragia fta Francisella tularensis subsp. holarctica FTNF002-00 ftl Francisella tularensis subsp. holarctica LVS fth Francisella tularensis subsp. holarctica OSU18 ftm Francisella tularensis subsp. mediasiatica FSC147 ftf Francisella tularensis subsp. tularensis FSC 198 ftu Francisella tularensis subsp. tularensis SCHU S4 ftw Francisella tularensis subsp. tularensis WY96-3418 fal Frankia alni fra Frankia sp. CcI3 fre Frankia sp. EAN1pec fgr Fusarium graminearum fnu Fusobacterium nucleatum gca Gallionella capsiferriformans gga Gallus gallus (chicken) gpb Gamma proteobacterium HdN1 gva Gardnerella vaginalis gau Gemmatimonas aurantiaca gka Geobacillus kaustophilus gct Geobacillus sp. C56-T3 gwc Geobacillus sp. WCH70 gym Geobacillus sp. Y412MC10 gyc Geobacillus sp. Y412MC61 gtn Geobacillus thermodenitrificans gbm Geobacter bemidjiensis glo Geobacter lovleyi gme Geobacter metallireducens geo Geobacter sp. FRC-32 gem Geobacter sp. M21 gsu Geobacter sulfurreducens gur Geobacter uraniumreducens gob Geodermatophilus obscurus gla Giardia lamblia gvi Gloeobacter violaceus gdi Gluconacetobacter diazotrophicus PAl 5 (Brazil) gdj Gluconacetobacter diazotrophicus PAl 5 (JGI) gox Gluconobacter oxydans gbr Gordonia bronchialis gfo Gramella forsetii gbe Granulibacter bethesdensis hdu Haemophilus ducreyi hit Haemophilus influenzae 86-028NP (nontypeable) hip Haemophilus influenzae PittEE hiq Haemophilus influenzae PittGG hin Haemophilus influenzae Rd KW20 (serotype d) hap Haemophilus parasuis hso Haemophilus somnus 129PT hsm Haemophilus somnus 2336 hch Hahella chejuensis hje Halalkalicoccus jeotgali hoh Haliangium ochraceum hma Haloarcula marismortui hsl Halobacterium salinarum R1 hal Halobacterium sp. NRC-1 hvo Haloferax volcanii hmu Halomicrobium mukohataei hwa Haloquadratum walsbyi hut Halorhabdus utahensis hha Halorhodospira halophila hla Halorubrum lacusprofundi htu Haloterrigena turkmenica hor Halothermothrix orenii hna Halothiobacillus neapolitanus hac Helicobacter acinonychis hhe Helicobacter hepaticus hms Helicobacter mustelae hpy Helicobacter pylori 26695 hpb Helicobacter pylori B38 hpl Helicobacter pylori B8 hpg Helicobacter pylori G27 hpa Helicobacter pylori HPAG1 hpj Helicobacter pylori J99 hpp Helicobacter pylori P12 hps Helicobacter pylori Shi470 hmo Heliobacterium modesticaldum hse Herbaspirillum seropedicae har Herminiimonas arsenicoxydans hau Herpetosiphon aurantiacus hba Hirschia baltica hsa Homo sapiens (human) hmg Hydra magnipapillata hth Hydrogenobacter thermophilus hya Hydrogenobaculum sp. Y04AAS1 hbu Hyperthermus butylicus hne Hyphomonas neptunium ilo Idiomarina loihiensis iho Ignicoccus hospitalis isc Ixodes scapularis (black-legged tick) jan Jannaschia sp. CCS1 jde Jonesia denitrificans kko Kangiella koreensis kra Kineococcus radiotolerans kpn Klebsiella pneumoniae kpe Klebsiella pneumoniae 342 kpu Klebsiella pneumoniae NTUH-K2044 kva Klebsiella variicola kla Kluyveromyces lactis krh Kocuria rhizophila kol Kosmotoga olearia kfl Kribbella flavida kse Kytococcus sedentarius lbc Laccaria bicolor lth Lachancea thermotolerans lac Lactobacillus acidophilus lbr Lactobacillus brevis lca Lactobacillus casei ATCC 334 lcb Lactobacillus casei BL23 lcz Lactobacillus casei Zhang lcr Lactobacillus crispatus ldb Lactobacillus delbrueckii ATCC 11842 lbu Lactobacillus delbrueckii ATCC BAA-365 lfe Lactobacillus fermentum lga Lactobacillus gasseri lhe Lactobacillus helveticus ljf Lactobacillus johnsonii FI9785 ljo Lactobacillus johnsonii NCC 533 lpj Lactobacillus plantarum JDM1 lpl Lactobacillus plantarum WCFS1 lre Lactobacillus reuteri DSM 20016 lrf Lactobacillus reuteri JCM 1112 lrh Lactobacillus rhamnosus GG lrl Lactobacillus rhamnosus Lc 705 lsa Lactobacillus sakei lsl Lactobacillus salivarius llm Lactococcus lactis subsp. cremoris MG1363 llc Lactococcus lactis subsp. cremoris SK11 lla Lactococcus lactis subsp. lactis IL1403 llk Lactococcus lactis subsp. lactis KF147 lhk Laribacter hongkongensis lip Lawsonia intracellularis llo Legionella longbeachae lpa Legionella pneumophila 2300/99 Alcoy lpc Legionella pneumophila Corby lpf Legionella pneumophila Lens lpp Legionella pneumophila Paris lpn Legionella pneumophila Philadelphia 1 lxx Leifsonia xyli xyli CTCB07 lbz Leishmania braziliensis lif Leishmania infantum lma Leishmania major lbf Leptospira biflexa serovar Patoc Patoc 1 (Ames) lbi Leptospira biflexa serovar Patoc Patoc 1 (Paris) lbj Leptospira borgpetersenii JB197 lbl Leptospira borgpetersenii L550 lic Leptospira interrogans serovar Copenhageni lil Leptospira interrogans serovar lai lch Leptothrix cholodnii lba Leptotrichia buccalis lci Leuconostoc citreum lgs Leuconostoc gasicomitatum lki Leuconostoc kimchii lme Leuconostoc mesenteroides lin Listeria innocua lmn Listeria monocytogenes 08-5578 lmy Listeria monocytogenes 08-5923 lmc Listeria monocytogenes Clip81459 lmo Listeria monocytogenes EGD-e lmf Listeria monocytogenes F2365 lmh Listeria monocytogenes HCC23 lsg Listeria seeligeri lwe Listeria welshimeri SLCC5334 lel Lodderomyces elongisporus lsp Lysinibacillus sphaericus mcc Macaca mulatta (rhesus monkey) mcl Macrococcus caseolyticus mgr Magnaporthe oryzae mgm Magnetococcus sp. MC-1 mag Magnetospirillum magneticum mgl Malassezia globosa msu Mannheimia succiniciproducens mmr Maricaulis maris maq Marinobacter aquaeolei mmw Marinomonas sp. MWYL1 mrb Meiothermus ruber msv Meiothermus silvanus mfl Mesoplasma florum mlo Mesorhizobium loti mes Mesorhizobium sp. BNC1 mse Metallosphaera sedula mru Methanobrevibacter ruminantium msi Methanobrevibacter smithii ATCC 35061 mfe Methanocaldococcus fervens mif Methanocaldococcus infernus mja Methanocaldococcus jannaschii mfs Methanocaldococcus sp. FS406-22 mvu Methanocaldococcus vulcanius mpd Methanocella paludicola mbu Methanococcoides burtonii mae Methanococcus aeolicus mmq Methanococcus maripaludis C5 mmx Methanococcus maripaludis C6 mmz Methanococcus maripaludis C7 mmp Methanococcus maripaludis S2 mvn Methanococcus vannielii mvo Methanococcus voltae mla Methanocorpusculum labreanum mem Methanoculleus marisnigri mev Methanohalobium evestigatum mmh Methanohalophilus mahii mpi Methanoplanus petrolearius mka Methanopyrus kandleri mtp Methanosaeta thermophila mac Methanosarcina acetivorans mba Methanosarcina barkeri mma Methanosarcina mazei mst Methanosphaera stadtmanae mhu Methanospirillum hungatei mmg Methanothermobacter marburgensis mth Methanothermobacter thermautotrophicus min Methylacidiphilum infernorum mpt Methylibium petroleiphilum mfa Methylobacillus flagellatus mch Methylobacterium chloromethanicum mex Methylobacterium extorquens mea Methylobacterium extorquens AM1 mdi Methylobacterium extorquens DM4 mno Methylobacterium nodulans mpo Methylobacterium populi mrd Methylobacterium radiotolerans met Methylobacterium sp. 4-46 msl Methylocella silvestris mca Methylococcus capsulatus mmb Methylotenera mobilis meh Methylotenera sp. 301 mei Methylovorus sp. SIP3-4 pgu Meyerozyma guilliermondii mlu Micrococcus luteus mar Microcystis aeruginosa mau Micromonospora aurantiaca mms Minibacterium massiliensis mcu Mobiluncus curtisii mpr Moniliophthora perniciosa mdo Monodelphis domestica (opossum) mbr Monosiga brevicollis mta Moorella thermoacetica mct Moraxella catarrhalis mmu Mus musculus (mouse) mab Mycobacterium abscessus ATCC 19977 mav Mycobacterium avium 104 mpa Mycobacterium avium paratuberculosis mbo Mycobacterium bovis AF2122/97 mbb Mycobacterium bovis BCG Pasteur 1173P2 mbt Mycobacterium bovis BCG Tokyo 172 mgi Mycobacterium gilvum mlb Mycobacterium leprae Br4923 mle Mycobacterium leprae TN mmi Mycobacterium marinum M msm Mycobacterium smegmatis mjl Mycobacterium sp. JLS mkm Mycobacterium sp. KMS mmc Mycobacterium sp. MCS mtc Mycobacterium tuberculosis CDC1551 mtf Mycobacterium tuberculosis F11 mra Mycobacterium tuberculosis H37Ra mtu Mycobacterium tuberculosis H37Rv mtb Mycobacterium tuberculosis KZN 1435 mul Mycobacterium ulcerans mva Mycobacterium vanbaalenii mal Mycoplasma agalactiae 5632 maa Mycoplasma agalactiae PG2 mat Mycoplasma arthritidis mcp Mycoplasma capricolum mco Mycoplasma conjunctivae mcd Mycoplasma crocodyli mga Mycoplasma gallisepticum mge Mycoplasma genitalium mho Mycoplasma hominis mhy Mycoplasma hyopneumoniae 232 mhp Mycoplasma hyopneumoniae 7448 mhj Mycoplasma hyopneumoniae J mhr Mycoplasma hyorhinis mmo Mycoplasma mobile mmy Mycoplasma mycoides mpe Mycoplasma penetrans mpn Mycoplasma pneumoniae mpu Mycoplasma pulmonis msy Mycoplasma synoviae mxa Myxococcus xanthus ngr Naegleria gruberi nml Nakamurella multipartita neq Nanoarchaeum equitans nvi Nasonia vitripennis (jewel wasp) nth Natranaerobius thermophilus nmg Natrialba magadii nph Natronomonas pharaonis nam Nautilia profundicola ngo Neisseria gonorrhoeae FA 1090 ngk Neisseria gonorrhoeae NCCP11945 nmn Neisseria meningitidis 053442 (serogroup C) nmc Neisseria meningitidis FAM18 (serogroup C) nme Neisseria meningitidis MC58 (serogroup B) nma Neisseria meningitidis Z2491 (serogroup A) nmi Neisseria meningitidis alpha14 nve Nematostella vectensis (sea anemone) nri Neorickettsia risticii nse Neorickettsia sennetsu nfi Neosartorya fischeri ncr Neurospora crassa nis Nitratiruptor sp. SB155-2 nha Nitrobacter hamburgensis nwi Nitrobacter winogradskyi nhl Nitrosococcus halophilus noc Nitrosococcus oceani nwa Nitrosococcus watsoni neu Nitrosomonas europaea net Nitrosomonas eutropha nmr Nitrosopumilus maritimus nmu Nitrosospira multiformis nfa Nocardia farcinica nca Nocardioides sp. JS614 nda Nocardiopsis dassonvillei npu Nostoc punctiforme nar Novosphingobium aromaticivorans oih Oceanobacillus iheyensis oan Ochrobactrum anthropi ooe Oenococcus oeni oca Oligotropha carboxidovorans ols Olsenella uli ote Opitutus terrae ots Orientia tsutsugamushi Boryong ott Orientia tsutsugamushi Ikeda oaa Ornithorhynchus anatinus (platypus) osa Oryza sativa japonica (Japanese rice) olu Ostreococcus lucimarinus pjd Paenibacillus sp. JDR-2 ptr Pan troglodytes (chimpanzee) pam Pantoea ananatis pdi Parabacteroides distasonis pde Paracoccus denitrificans ptm Paramecium tetraurelia pla Parvibaculum lavamentivorans pbr Parvularcula bermudensis pmu Pasteurella multocida pct Pectobacterium carotovorum pwa Pectobacterium wasabiae phu Pediculus humanus corporis (human body louse) ppe Pediococcus pentosaceus phe Pedobacter heparinus pca Pelobacter carbinolicus ppd Pelobacter propionicus plt Pelodictyon luteolum pph Pelodictyon phaeoclathratiforme pth Pelotomaculum thermopropionicum pcs Penicillium chrysogenum pmx Persephonella marina pmo Petrotoga mobilis pti Phaeodactylum tricornutum pno Phaeosphaeria nodorum pzu Phenylobacterium zucineum ppr Photobacterium profundum pay Photorhabdus asymbiotica plu Photorhabdus luminescens ppp Physcomitrella patens subsp. patens ayw Phytoplasma AYWB poy Phytoplasma OY ppa Pichia pastoris pto Picrophilus torridus psl Pirellula staleyi plm Planctomyces limnophilus pbe Plasmodium berghei pcb Plasmodium chabaudi pfa Plasmodium falciparum 3D7 pfd Plasmodium falciparum Dd2 pfh Plasmodium falciparum HB3 pkn Plasmodium knowlesi pvx Plasmodium vivax pyo Plasmodium yoelii pan Podospora anserina pna Polaromonas naphthalenivorans pol Polaromonas sp. JS666 pne Polynucleobacter necessarius pnu Polynucleobacter sp. QLW-P1DMWA-1 pop Populus trichocarpa (black cottonwood) pgn Porphyromonas gingivalis ATCC 33277 pgi Porphyromonas gingivalis W83 ppl Postia placenta pmz Prevotella melaninogenica pru Prevotella ruminicola pmb Prochlorococcus marinus AS9601 pmm Prochlorococcus marinus MED4 pmj Prochlorococcus marinus MIT 9211 pmh Prochlorococcus marinus MIT 9215 pmg Prochlorococcus marinus MIT 9301 pmf Prochlorococcus marinus MIT 9303 pmt Prochlorococcus marinus MIT 9313 pmc Prochlorococcus marinus MIT 9515 pmi Prochlorococcus marinus MIT9312 pme Prochlorococcus marinus NATL1A pmn Prochlorococcus marinus NATL2A pma Prochlorococcus marinus SS120 pac Propionibacterium acnes KPA171202 pak Propionibacterium acnes SK137 pfr Propionibacterium freudenreichii paa Prosthecochloris aestuarii pmr Proteus mirabilis pat Pseudoalteromonas atlantica pha Pseudoalteromonas haloplanktis pag Pseudomonas aeruginosa LESB58 pap Pseudomonas aeruginosa PA7 pae Pseudomonas aeruginosa PAO1 pau Pseudomonas aeruginosa UCBPP-PA14 pen Pseudomonas entomophila pfl Pseudomonas fluorescens Pf-5 pfo Pseudomonas fluorescens Pf0-1 pfs Pseudomonas fluorescens SBW25 pmy Pseudomonas mendocina ppf Pseudomonas putida F1 ppg Pseudomonas putida GB-1 ppu Pseudomonas putida KT2440 ppw Pseudomonas putida W619 psa Pseudomonas stutzeri psp Pseudomonas syringae pv. phaseolicola 1448A psb Pseudomonas syringae pv. syringae B728a pst Pseudomonas syringae pv. tomato DC3000 par Psychrobacter arcticum pcr Psychrobacter cryohalolentis prw Psychrobacter sp. PRwf-1 pin Psychromonas ingrahamii pai Pyrobaculum aerophilum pas Pyrobaculum arsenaticum pcl Pyrobaculum calidifontis pis Pyrobaculum islandicum pab Pyrococcus abyssi pfu Pyrococcus furiosus pho Pyrococcus horikoshii reh Ralstonia eutropha H16 reu Ralstonia eutropha JMP134 rpf Ralstonia pickettii 12D rpi Ralstonia pickettii 12J rsc Ralstonia solanacearum CFBP2957 rso Ralstonia solanacearum GMI1000 rsl Ralstonia solanacearum PSI07 rno Rattus norvegicus (rat) rsa Renibacterium salmoninarum ret Rhizobium etli CFN 42 rec Rhizobium etli CIAT 652 rle Rhizobium leguminosarum rlg Rhizobium leguminosarum bv. trifolii WSM1325 rlt Rhizobium leguminosarum bv. trifolii WSM2304 rhi Rhizobium sp. NGR234 rcp Rhodobacter capsulatus rsp Rhodobacter sphaeroides 2.4.1 rsq Rhodobacter sphaeroides ATCC 17025 rsh Rhodobacter sphaeroides ATCC 17029 rsk Rhodobacter sphaeroides KD131 rer Rhodococcus erythropolis rop Rhodococcus opacus rha Rhodococcus sp. RHA1 rfr Rhodoferax ferrireducens rba Rhodopirellula baltica rpe Rhodopseudomonas palustris BisA53 rpc Rhodopseudomonas palustris BisB18 rpd Rhodopseudomonas palustris BisB5 rpa Rhodopseudomonas palustris CGA009 rpb Rhodopseudomonas palustris HaA2 rpt Rhodopseudomonas palustris TIE-1 rce Rhodospirillum centenum rru Rhodospirillum rubrum rmr Rhodothermus marinus rcu Ricinus communis (castor bean) raf Rickettsia africae rak Rickettsia akari rbo Rickettsia bellii OSU 85-389 rbe Rickettsia bellii RML369-C rcm Rickettsia canadensis rco Rickettsia conorii rfe Rickettsia felis rms Rickettsia massiliae rpk Rickettsia peacockii rpr Rickettsia prowazekii rrj Rickettsia rickettsii Iowa rri Rickettsia rickettsii Sheila Smith rty Rickettsia typhi rbi Robiginitalea biformata rca Roseiflexus castenholzii DSM13941 rrs Roseiflexus sp. RS-1 rde Roseobacter denitrificans rmu Rothia mucilaginosa rxy Rubrobacter xylanophilus svi Saccharomonospora viridis sce Saccharomyces cerevisiae (budding yeast) sde Saccharophagus degradans sen Saccharopolyspora erythraea srm Salinibacter ruber saq Salinispora arenicola stp Salinispora tropica ses Salmonella enterica subsp. arizonae sea Salmonella enterica subsp. enterica serovar Agona sec Salmonella enterica subsp. enterica serovar Choleraesuis sed Salmonella enterica subsp. enterica serovar Dublin set Salmonella enterica subsp. enterica serovar Enteritidis seg Salmonella enterica subsp. enterica serovar Gallinarum seh Salmonella enterica subsp. enterica serovar Heidelberg see Salmonella enterica subsp. enterica serovar Newport sek Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601 spt Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150 spq Salmonella enterica subsp. enterica serovar Paratyphi B sei Salmonella enterica subsp. enterica serovar Paratyphi C sew Salmonella enterica subsp. enterica serovar Schwarzengrund sty Salmonella enterica subsp. enterica serovar Typhi CT18 stt Salmonella enterica subsp. enterica serovar Typhi Ty2 stm Salmonella enterica subsp. enterica serovar Typhimurium LT2 ske Sanguibacter keddieii pic Scheffersomyces stipitis smm Schistosoma mansoni spo Schizosaccharomyces pombe (fission yeast) ssl Sclerotinia sclerotiorum str Sebaldella termitidis srt Segniliparus rotundus spe Serratia proteamaculans saz Shewanella amazonensis sbl Shewanella baltica OS155 sbm Shewanella baltica OS185 sbn Shewanella baltica OS195 sbp Shewanella baltica OS223 sdn Shewanella denitrificans sfr Shewanella frigidimarina shl Shewanella halifaxensis slo Shewanella loihica son Shewanella oneidensis spl Shewanella pealeana swp Shewanella piezotolerans WP3 spc Shewanella putrefaciens sse Shewanella sediminis shn Shewanella sp. ANA-3 she Shewanella sp. MR-4 shm Shewanella sp. MR-7 shw Shewanella sp. W3-18-1 svo Shewanella violacea swd Shewanella woodyi ATCC 51908 sbc Shigella boydii CDC 3083-94 sbo Shigella boydii Sb227 sdy Shigella dysenteriae sfx Shigella flexneri 2457T (serotype 2a) sfl Shigella flexneri 301 (serotype 2a) sfv Shigella flexneri 8401 (serotype 5b) ssn Shigella sonnei slt Sideroxydans lithotrophicus sil Silicibacter pomeroyi sit Silicibacter sp. TM1040 smd Sinorhizobium medicae sme Sinorhizobium meliloti shi Slackia heliotrinireducens sgl Sodalis glossinidius sus Solibacter usitatus scl Sorangium cellulosum sbi Sorghum bicolor (sorghum) sti Sphaerobacter thermophilus sjp Sphingobium japonicum swi Sphingomonas wittichii sal Sphingopyxis alaskensis ssm Spirochaeta smaragdinae sta Spirochaeta thermophila sli Spirosoma linguale sna Stackebrandtia nassauensis sac Staphylococcus aureus COL (MRSA) sad Staphylococcus aureus ED98 sah Staphylococcus aureus JH1 (MRSA/VSSA) saj Staphylococcus aureus JH9 (MRSA/VRSA) sar Staphylococcus aureus MRSA252 (MRSA) sas Staphylococcus aureus MSSA476 (MSSA) sam Staphylococcus aureus MW2 (CA-MRSA) saw Staphylococcus aureus Mu3 (MRSA/hetero-VISA) sav Staphylococcus aureus Mu50 (MRSA/VISA) sau Staphylococcus aureus N315 (MRSA/VSSA) sao Staphylococcus aureus NCTC8325 sae Staphylococcus aureus Newman sab Staphylococcus aureus RF122 saa Staphylococcus aureus USA300_FPR3757 (CA-MRSA) sax Staphylococcus aureus USA300_TCH1516 (CA-MSSA) sca Staphylococcus carnosus sep Staphylococcus epidermidis ATCC 12228 ser Staphylococcus epidermidis RP62A sha Staphylococcus haemolyticus slg Staphylococcus lugdunensis ssp Staphylococcus saprophyticus shc Staphylothermus hellenicus smr Staphylothermus marinus sno Starkeya novella sml Stenotrophomonas maltophilia K279a smt Stenotrophomonas maltophilia R551-3 smf Streptobacillus moniliformis sag Streptococcus agalactiae 2603 (serotype V) sak Streptococcus agalactiae A909 (serotype Ia) san Streptococcus agalactiae NEM316 (serotype III) sds Streptococcus dysgalactiae seu Streptococcus equi subsp. equi 4047 seq Streptococcus equi subsp. zooepidemicus H70 sez Streptococcus equi subsp. zooepidemicus MGCS10565 sga Streptococcus gallolyticus sgo Streptococcus gordonii smb Streptococcus mitis B6 smc Streptococcus mutans NN2025 smu Streptococcus mutans UA159 snb Streptococcus pneumoniae 670-6B snm Streptococcus pneumoniae 70585 snp Streptococcus pneumoniae AP200 sne Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage) spw Streptococcus pneumoniae CGSP14 (serotype 14) spd Streptococcus pneumoniae D39 (virulent serotype 2) spx Streptococcus pneumoniae G54 (serotype 19F) spv Streptococcus pneumoniae Hungary19A 6 sjj Streptococcus pneumoniae JJA spp Streptococcus pneumoniae P1031 spr Streptococcus pneumoniae R6 (avirulent) snc Streptococcus pneumoniae TCH8431/19A spn Streptococcus pneumoniae TIGR4 (virulent serotype 4) snt Streptococcus pneumoniae Taiwan19F-14 sph Streptococcus pyogenes MGAS10270 (serotype M2) spa Streptococcus pyogenes MGAS10394 (serotype M6) spi Streptococcus pyogenes MGAS10750 (serotype M4) spj Streptococcus pyogenes MGAS2096 (serotype M12) spg Streptococcus pyogenes MGAS315 (serotype M3) spz Streptococcus pyogenes MGAS5005 (serotype M1) spb Streptococcus pyogenes MGAS6180 (serotype M28) spm Streptococcus pyogenes MGAS8232 (serotype M18) spk Streptococcus pyogenes MGAS9429 (serotype M12) spf Streptococcus pyogenes Manfredo (serotype M5) soz Streptococcus pyogenes NZ131 (serotype M49) spy Streptococcus pyogenes SF370 (serotype M1) sps Streptococcus pyogenes SSI-1 (serotype M3) ssa Streptococcus sanguinis ssu Streptococcus suis 05ZYH33 ssv Streptococcus suis 98HAH33 ssb Streptococcus suis BM407 ssi Streptococcus suis P1/7 sss Streptococcus suis SC84 stc Streptococcus thermophilus CNRZ1066 ste Streptococcus thermophilus LMD-9 stl Streptococcus thermophilus LMG18311 sub Streptococcus uberis sma Streptomyces avermitilis sco Streptomyces coelicolor sgr Streptomyces griseus scb Streptomyces scabiei sro Streptosporangium roseum spu Strongylocentrotus purpuratus (purple sea urchin) sai Sulfolobus acidocaldarius sii Sulfolobus islandicus L.D.8.5 sis Sulfolobus islandicus L.S.2.15 sia Sulfolobus islandicus M.14.25 sim Sulfolobus islandicus M.16.27 sid Sulfolobus islandicus M.16.4 siy Sulfolobus islandicus Y.G.57.14 sin Sulfolobus islandicus Y.N.15.51 sso Sulfolobus solfataricus sto Sulfolobus tokodaii saf Sulfurihydrogenibium azorense sul Sulfurihydrogenibium sp. YO3AOP1 sua Sulfurimonas autotrophica tdn Sulfurimonas denitrificans sdl Sulfurospirillum deleyianum sun Sulfurovum sp. NBC37-1 ssc Sus scrofa (pig) sth Symbiobacterium thermophilum syc Synechococcus elongatus PCC6301 syf Synechococcus elongatus PCC7942 syg Synechococcus sp. CC9311 syd Synechococcus sp. CC9605 sye Synechococcus sp. CC9902 syp Synechococcus sp. PCC7002 syr Synechococcus sp. RCC307 syx Synechococcus sp. WH7803 syw Synechococcus sp. WH8102 syn Synechocystis sp. PCC6803 sfu Syntrophobacter fumaroxidans swo Syntrophomonas wolfei slp Syntrophothermus lipocalidus sat Syntrophus aciditrophicus tgu Taeniopygia guttata (zebra finch) ttu Teredinibacter turnerae tet Tetrahymena thermophila tps Thalassiosira pseudonana tmz Thauera sp. MZ1T tan Theileria annulata tpv Theileria parva tai Thermanaerovibrio acidaminovorans tjr Thermincola potens JR tit Thermoanaerobacter italicus tmt Thermoanaerobacter mathranii tpd Thermoanaerobacter pseudethanolicus thx Thermoanaerobacter sp. X513 tex Thermoanaerobacter sp. X514 tte Thermoanaerobacter tengcongensis ttm Thermoanaerobacterium thermosaccharolyticum ttr Thermobaculum terrenum tfu Thermobifida fusca tbi Thermobispora bispora tga Thermococcus gammatolerans tko Thermococcus kodakaraensis ton Thermococcus onnurineus tsi Thermococcus sibiricus tal Thermocrinis albus tye Thermodesulfovibrio yellowstonii tpe Thermofilum pendens tro Thermomicrobium roseum tcu Thermomonospora curvata tac Thermoplasma acidophilum tvo Thermoplasma volcanium tne Thermoproteus neutrophilus toc Thermosediminibacter oceani taf Thermosipho africanus tme Thermosipho melanesiensis tag Thermosphaera aggregans tel Thermosynechococcus elongatus tle Thermotoga lettingae tma Thermotoga maritima tnp Thermotoga naphthophila tna Thermotoga neapolitana tpt Thermotoga petrophila trq Thermotoga sp. RQ2 tth Thermus thermophilus HB27 ttj Thermus thermophilus HB8 tgr Thioalkalivibrio sp. HL-EbGR7 tkm Thioalkalivibrio sp. K90mix tbd Thiobacillus denitrificans tcx Thiomicrospira crunogena tin Thiomonas intermedia tau Tolumonas auensis tgo Toxoplasma gondii tde Treponema denticola tpa Treponema pallidum subsp. pallidum Nichols tpp Treponema pallidum subsp. pallidum SS14 tca Tribolium castaneum (red flour beetle) ter Trichodesmium erythraeum tva Trichomonas vaginalis tad Trichoplax adhaerens tws Tropheryma whipplei TW08/27 twh Tropheryma whipplei Twist tra Truepera radiovictrix tbr Trypanosoma brucei tcr Trypanosoma cruzi tpr Tsukamurella paurometabola tml Tuber melanosporum ure Uncinocarpus reesii rsd Uncultured Termite group 1 bacterium phylotype Rs-D17 rci Uncultured methanogenic archaeon RC-I upa Ureaplasma parvum serovar 3 ATCC 27815 uur Ureaplasma parvum serovar 3 ATCC 700970 uue Ureaplasma urealyticum serovar 10 ATCC 33699 uma Ustilago maydis vpo Vanderwaltozyma polyspora vap Variovorax paradoxus vpr Veillonella parvula vei Verminephrobacter eiseniae vcm Vibrio cholerae M66-2 vcj Vibrio cholerae MJ-1236 vch Vibrio cholerae O1 vco Vibrio cholerae O395 vfi Vibrio fischeri vfm Vibrio fischeri MJ11 vha Vibrio harveyi vpa Vibrio parahaemolyticus vex Vibrio sp. Ex25 vsp Vibrio splendidus vvu Vibrio vulnificus CMCP6 vvy Vibrio vulnificus YJ016 vvi Vitis vinifera (wine grape) vdi Vulcanisaeta distributa wch Waddlia chondrophila wbr Wigglesworthia glossinidia wpi Wolbachia pipientis wri Wolbachia sp. wRi wbm Wolbachia wBm wol Wolbachia wMel wsu Wolinella succinogenes xau Xanthobacter autotrophicus xal Xanthomonas albilineans xac Xanthomonas axonopodis xcb Xanthomonas campestris pv. campestris 8004 xcc Xanthomonas campestris pv. campestris ATCC 33913 xca Xanthomonas campestris pv. campestris B100 xcv Xanthomonas campestris pv. vesicatoria xoo Xanthomonas oryzae KACC10331 xom Xanthomonas oryzae MAFF311018 xop Xanthomonas oryzae PXO99A xla Xenopus laevis (African clawed frog) xtr Xenopus tropicalis (western clawed frog) xbo Xenorhabdus bovienii xne Xenorhabdus nematophila xce Xylanimonas cellulosilytica xfa Xylella fastidiosa 9a5c xfm Xylella fastidiosa M12 xfn Xylella fastidiosa M23 xft Xylella fastidiosa Temecula1 yli Yarrowia lipolytica yen Yersinia enterocolitica ypm Yersinia pestis 91001 (biovar Microtus) ypg Yersinia pestis Angola ypa Yersinia pestis Antiqua (biovar Antiqua) ype Yersinia pestis CO92 (biovar Orientalis) ypk Yersinia pestis KIM 10 (biovar Mediaevalis) ypn Yersinia pestis Nepal516 (biovar Antiqua) ypp Yersinia pestis Pestoides F ypz Yersinia pestis Z176003 ypi Yersinia pseudotuberculosis IP31758 (serotype O 1b) yps Yersinia pseudotuberculosis IP32953 (serotype I) ypb Yersinia pseudotuberculosis PB1/+ ypy Yersinia pseudotuberculosis YPIII zma Zea mays (maize) zpr Zunongwangia profunda zro Zygosaccharomyces rouxii zmo Zymomonas mobilis zmn Zymomonas mobilis subsp. mobilis NCIMB 11163